BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018H01SP1|AL427385
(693 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig501 794 0.0
3x_Contig1055 466 e-131
>3x_Contig501
Length = 2416
Score = 794 bits (395), Expect = 0.0
Identities = 399/401 (99%)
Strand = Plus / Plus
Query: 1 gatcaacccaccaacagcatagaaataactcccagatataccataattatacgactcagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1480 gatcaacccaccaacagcatagaaataactcccagatataccataattatacgactcagt 1539
Query: 61 ggcagattgcaacaaagtcaacgaccaacaccaagaactgacgatagavacgaccatcaa 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1540 ggcagattgcaacaaagtcaacgaccaacaccaagaactgacgatagaaacgaccatcaa 1599
Query: 121 acctaatggcacatttcttgaagcagcggtaaattcatcagcctgtgatgatttattcga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1600 acctaatggcacatttcttgaagcagcggtaaattcatcagcctgtgatgatttattcga 1659
Query: 181 gaagaatctgttttgtagataagtgacgatgttcatcaccacggcgaagaacaaaccaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1660 gaagaatctgttttgtagataagtgacgatgttcatcaccacggcgaagaacaaaccaac 1719
Query: 241 accaattacgacaccatacccaacaccttgagagaaaaccggttccatgctgcaaagatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1720 accaattacgacaccatacccaacaccttgagagaaaaccggttccatgctgcaaagatt 1779
Query: 301 cacttacgtttgcttctttattttcctttcttctgaacttcagataattcatgaaatcca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1780 cacttacgtttgcttctttattttcctttcttctgaacttcagataattcatgaaatcca 1839
Query: 361 acagtgagtcccttgatgcttcaagagctactcttatatat 401
||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1840 acagtgagtaccttgatgcttcaagagctactcttatatat 1880
>3x_Contig1055
Length = 3919
Score = 466 bits (232), Expect = e-131
Identities = 254/265 (95%)
Strand = Plus / Plus
Query: 429 gtgncgrtgtatggggcatcacaaaaccggaactgtggaacgccttagcctctatttgcc 488
||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtgacgatgtatgaagcatcacaaaaccggaactgtggaacgccttagcctctatttgcc 384
Query: 489 tctatttgcctatccgctatctcgatggaccctatgggtctrragattccgtcccgcaga 548
||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 385 tctatttgcctatccgctatctcgatggaccctatggatctaaagattccgtcccgcaga 444
Query: 549 agaccttaaragtgagtgttgcgctggtatctcacggtagcacttagagtacttgcggaa 608
||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agaccttaaaagtaagtattgcgctggtatctcacggtagcacttagagtacttgcggaa 504
Query: 609 cggtaacttatggtactgatgatgaragtggggcaactgactgatggatagtttgaagac 668
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 505 cggtaacttatggtactgatgatgaaagtggggcaactgactgatggatagtttgaagac 564
Query: 669 acggaaattacatgctgtgaacaca 693
|||||||||||||||||||||||||
Sbjct: 565 acggaaattacatgctgtgaacaca 589
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4104
Number of Sequences: 1807
Number of extensions: 4104
Number of successful extensions: 107
Number of sequences better than 1.0e-20: 2
length of query: 693
length of database: 10,358,551
effective HSP length: 16
effective length of query: 677
effective length of database: 10,329,639
effective search space: 6993165603
effective search space used: 6993165603
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.6 bits)
S2: 50 (101.0 bits)